Wesley O. Johnson

  1. Split Hamiltonian Monte Carlo.

    Authors: Radford M. Neal, Babak Shahbaba, Shiwei Lan, Wesley O. Johnson
    Subjects: Computation
    Abstract

    We show how the Hamiltonian Monte Carlo algorithm can sometimes be speeded up
    by "splitting" the Hamiltonian in a way that allows much of the movement around
    the state space to be done at low computational cost. One context where this is
    possible is when the log density of the distribution of interest (the potential
    energy function) can be written as the log of a Gaussian density, which is a
    quadratic function, plus a slowly varying function. Hamiltonian dynamics for
    quadratic energy functions can be analytically solved.

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