Rodrigo Labouriau

  1. Characterization of differentially expressed genes using high-dimensional co-expression networks.

    Authors: Gabriel C. G. de Abreu, Rodrigo Labouriau
    Subjects: Applications
    Abstract

    We present a technique to characterize differentially expressed genes in
    terms of their position in a high-dimensional co-expression network. The set-up
    of Gaussian graphical models is used to construct representations of the
    co-expression network in such a way that redundancy and the propagation of
    spurious information along the network are avoided. The proposed inference
    procedure is based on the minimization of the Bayesian Information Criterion
    (BIC) in the class of decomposable graphical models.

  2. High-dimensional Graphical Model Search with gRapHD R Package.

    Authors: Gabriel C. G. de Abreu, Rodrigo Labouriau, David Edwards
    Subjects: Machine Learning
    Abstract

    This paper presents the R package gRapHD for efficient selection of
    high-dimensional undirected graphical models. The package provides tools for
    selecting trees, forests and decomposable models minimizing information
    criteria such as AIC or BIC, and for displaying the independence graphs of the
    models. It has also some useful tools for analysing graphical structures. It
    supports the use of discrete, continuous, or both types of variables.

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